Job Description P0ADP7 Confidence 5.91% Date Thu Jan 5 11:21:29 GMT 2012 Rank 76 Aligned Residues 64 % Identity 6% Template c3hugA_ PDB info PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		D	I	Q	V	V	Q	N	F	V	A	L	A	D	L	A	E	F	D	P	A	E	L	L	A	.	P	Y	T	G	D	I	A	A	E	G	I	S	K	A	M	R	G	G	A	K	F	L	H	H	G	I	K	R	Q	Q	R	Y	V	A	E	A	I	T	E	E
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		A	A	L	D	R	L	L	I	A	D	A	L	A	Q	L	S	A	E	H	R	A	V	I	Q	R	S	Y	Y	R	G	W	S	T	A	Q	I	A	T	D	L	G	I	A	E	G	T	V	K	S	R	L	H	Y	A	V	R	A	L	R	L	T	L	Q	E	L
Template Known Secondary structure															T	S													T	S												T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions