Job Description Q00042 Confidence 89.86% Date Thu Jan 5 12:33:20 GMT 2012 Rank 219 Aligned Residues 52 % Identity 21% Template c3eihB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas Resolution 3.25 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		G	D	T	T	A	E	N	D	K	K	M	L	S	N	A	F	I	E	T	A	D	F	R	T	L	I	E	T	D	D	R	T	I	V	V	.	G	R	R	G	T	G	K	S	A	L	F	I	Q	L	N	E	H
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		G	L	E	G	A	K	E	A	L	K	E	A	V	I	L	P	V	K	F	P	H	L	F	K	G	N	R	K	P	T	S	G	I	L	L	Y	G	P	P	G	T	G	K	S	Y	L	A	K	A	V	A	T	E
Template Known Secondary structure		S													T						G	G	G			T	T												S	T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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