Job Description Q00042 Confidence 82.77% Date Thu Jan 5 12:33:20 GMT 2012 Rank 455 Aligned Residues 54 % Identity 17% Template c2wjyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:regulator of nonsense transcripts 1; PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2 orthorhombic form Resolution 2.50 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	R	T	L	I	E	T	D	D	R	T	I	V	V	G	R	R	G	T	G	K	S	A	L	F	I	Q	L	N	E	H	W	K	K	D	K	K	I	L	I	L	S	F	S	P	D	D	S	Q	I	I	G	F
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		Y	A	V	K	T	V	L	Q	.	R	P	L	S	L	I	Q	G	P	P	G	T	G	K	T	V	T	S	A	T	I	V	Y	H	L	A	R	Q	G	N	G	P	V	L	V	C	A	P	S	N	I	A	V	D	Q	L
Template Known Secondary structure									T	.	S	S								T	T	S															T	T		S	S							S	S
Template Predicted Secondary structure										.
Template SS confidence
		477	.	.	480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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