 |
Job Description | Q00042 | Confidence | 88.37% | Date | Thu Jan 5 12:33:20 GMT 2012 |
Rank | 290 | Aligned Residues | 52 |
% Identity | 12% | Template | c2iusB_ |
PDB info |
PDB header:membrane protein | Chain: B: PDB Molecule:dna translocase ftsk; |
PDBTitle: e. coli ftsk motor domain
|
Resolution | 2.7 Å |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | T | D | D | R | T | I | V | V | G | R | R | G | T | G | K | S | A | L | F | I | Q | L | N | E | H | W | K | K | D | K | K | . |
. |
. |
I | L | I | L | S | F | S | P | D | D | S | Q | I | I | G | F | R | S | M |
Query Conservation |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   | . | . | . |
|   |
|
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |
|
Template Sequence |   |
L | A | K | M | P | H | L | L | V | A | G | T | T | G | S | G | A | S | V | G | V | N | A | M | I | L | S | M | L | Y | K | A | Q | P | E | D | V | R | F | I | M | I | D | P | K | M | L | E | L | S | V | Y | E | G | I |
Template Known Secondary structure |   |
G | G | G | S |
| S |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | T |  |  |  |  |  |  |
| T | T | S | S | S | S | G | G | G | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
981 | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|