Phyre 2 alignment of Q00042 with c2e87A

Job Description Q00042
Confidence 80.93% Date Thu Jan 5 12:33:20 GMT 2012

Rank 499 Aligned Residues 24

% Identity 33% Template c2e87A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ph1320; PDBTitle: crystal structure of hypothetical gtp-binding protein ph1320 from2 pyrococcus horikoshii ot3, in complex with gdp

Resolution 2.35 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	38	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence	I	E	T	D	D	R	T	I	V	V	.	G	R	R	G	T	G	K	S	A	L	F	I	Q	L
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence	V	D	L	E	I	P	T	V	V	I	A	G	H	P	N	V	G	K	S	T	L	L	K	A	L
Template Known Secondary structure			S	S	S								S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
	163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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