Return to main results Retrieve Phyre Job Id

Job DescriptionQ00042
Confidence94.29%DateThu Jan 5 12:33:20 GMT 2012
Rank17Aligned Residues74
% Identity15%Templatec2ccjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of s. aureus thymidylate kinase complexed2 with thymidine monophosphate
Resolution1.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42..... ..50.........60.........70.........80.........90.........100.........110.....
Predicted Secondary structure 

.



























Query SS confidence 





.



































































Query Sequence  DRTIVV. GRRGTGKSALFIQLNEHWKKDKKILILSFSPDDSQIIGFRSMLKPFTGSFNLARAATRLLWRYAMLME
Query Conservation   




.









  

 
       
 

   
 
  
  
  


       

   
  


 




Alig confidence 





.



































































Template Conservation    

 
 
  





    
   
                                                  
Template Sequence  SAFITFEGPEGSGKTTVINEVYHRLVKDYDVIMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVL
Template Known Secondary structure 


TTS
TTTS
SSTT
T
SS

Template Predicted Secondary structure 

























Template SS confidence 










































































   2.......10.........20.........30.........40.........50.........60.........70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions