Job Description Q00042 Confidence 95.55% Date Thu Jan 5 12:33:20 GMT 2012 Rank 10 Aligned Residues 251 % Identity 19% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30										.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		D	K	K	M	L	S	N	A	F	I	E	.	.	.	.	.	.	.	.	.	T	A	D	F	R	T	L	I	.	.	.	.	.	.	.	.	E	T	D	D	R	T	I	V	V	G	R	R	G	T	G	K	S	A	L	F	I	Q	L	N	E	H	W	K	K	D	K	K	I	L	I	L	S	F	S	P	D	D	S	Q
Query Conservation													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	.	.	.	.
Template Known Secondary structure			G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	F	R	S	M	L	K	P	F	T	G	S	F	N	L	A	R	A	A	T	R	L	L	W	R	Y	A	M	L	M	E	I	A	S	Y	I	S	S	H	Y	K	L	S	S	Q	I	S	S	E	T	L	L	N	E	H	L	K	K	W	N	S	A	Q	G	D	I	L	R	K	C	R	L	V	A	K	E	Y	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	I	Y	R	N	F	T	A	I	I	G	E	I	A	R	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	T			S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	N	N	P	E	E	S	I	G	D	L	Q	F	N	L	N	I	S	E	I	E	N	N	I	V	S	L	L	E	R	S	D	R	K	V	V	I	L	M	D	K	L	D	E	A	Y	E	P	D	N	I	G	I	G	I	I	A	G	L	A	Y	A	S	I	E	L	N	Q	K	A	K	C	I	R	P	I	I	F	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																																						.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																						.	.	.	.
Template Sequence		.	.	.	.	.	.	.	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	.	.	.	.	A	D	K	L	G	A	F	R	I	A	L	V	I	V	G	H
Template Known Secondary structure		.	.	.	.	.	.	.	T					S	S																		T	T									T	G	G	G	S												T	T		.	.	.	.					S	S	B									S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																						.	.	.	.
Template SS confidence
									98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	N	I	F	R	S	L	S	K	E	D	P	D	Y	S	R	N	I	E	G	Q	V	I	R	L	H	W	D	W	A	Q	L	L	M	L	S	A	K	R	M	K	V	A	F	K	L	D	I	E	K	D	Q	R	V	W	D	R	C	T	A	D	D	L	K	G	R	N	G	F	K	R	C	L	Q	F	T	L	Y	R
Query Conservation
Alig confidence											.	.																																																	.	.	.	.	.	.
Template Conservation											.	.																																																	.	.	.	.	.	.
Template Sequence		N	D	A	V	L	N	N	L	D	.	.	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	.	.	.	.	.	.	D	I	T	G	A	Q	T	P	L	D	T	N	R	G	D
Template Known Secondary structure		S	T					T	S		.	.								T	T									B																B		T	T	S	S										.	.	.	.	.	.				S	B	S	S	T	T		T	T
Template Predicted Secondary structure											.	.																																																	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	D	L	L	S	L	L	N	E	A	F	F	S	A	F	R	E	N	R	E	T	I	I	N	T	D	L	E	Y	A	A	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E
Template Known Secondary structure																			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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