Job Description P42909 Confidence 44.82% Date Thu Jan 5 12:02:06 GMT 2012 Rank 9 Aligned Residues 92 % Identity 12% Template d1r8ja2 SCOP info Flavodoxin-like CheY-like N-terminal domain of the circadian clock protein KaiA Resolution 2.03

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																											.				.	.	.
Query SS confidence																											.				.	.	.
Query Sequence		I	R	F	F	T	I	E	K	T	I	N	V	I	G	K	A	A	P	H	Q	K	I	F	L	I	.	C	R	T	.	.	.	P	Q	T	V	R	K	L	V	E	G	G	I	D	L	K	D	V	N	V	G	N	M	H	F	S	E	G	K	K	Q	I	S	S	K	V	Y	V	D	D	Q	D	L	T	D	L	R	F	I
Query Conservation																											.				.	.	.
Alig confidence																											.				.	.	.
Template Conservation
Template Sequence		Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V	P	A	I	V	V	G	D	R	D	P	A	K	E	Q	L	Y	H	S	A	E	L	H	L	G	I	H	Q	L	E	Q	L	P	Y	Q
Template Known Secondary structure						S											S	T	T	S		S						T	T	S	T	T											T	T									S						S	S		S	S	B	T	T						T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	R	G	V	N	V	F	I	Q	D	V	P	G	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	A	A	L	A	E	F	L	R	L	A	P	V	E	T
Template Known Secondary structure														S			B
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions