Return to main results Retrieve Phyre Job Id

Job DescriptionP42909
Confidence25.31%DateThu Jan 5 12:02:06 GMT 2012
Rank17Aligned Residues64
% Identity6%Templated1qapa1
SCOP infoTIM beta/alpha-barrel Nicotinate/Quinolinate PRTase C-terminal domain-like NadC C-terminal domain-like
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70.........80.........90.........100.........110.........120.........130.........140....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  TIEKTINVIGKAAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQRGVNVF
Query Conservation 


 
   
        
 

     
   
   
  
  



      
 
 
   
 
   
   

 
   

 
 
Alig confidence 


































..








...............


















Template Conservation      
    
   
   
 


 
  

  
   
..

 
 

  ...............        
      
 
 
Template Sequence  SVRQAVEKAFWLHPDVPVEVEVENLDELDDALKAG. . ADIIMLDNF. . . . . . . . . . . . . . . NTDQMREAVKRVNGQARLE
Template Known Secondary structure  SSTTS
SSTT..
SSS
...............
TT
TT

Template Predicted Secondary structure 







..




...............




Template SS confidence 















































































   194.....200.........210.........220........ .230....... ..240.........250......
 
   145
Predicted Secondary structure 
Query SS confidence 
Query Sequence  I
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  V
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   257
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions