Return to main results Retrieve Phyre Job Id

Job DescriptionP42909
Confidence12.38%DateThu Jan 5 12:02:06 GMT 2012
Rank35Aligned Residues37
% Identity11%Templated1kgsa1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110......... 120.........130.........
Predicted Secondary structure 









...


Query SS confidence 
















. . .



















Query Sequence  KDVNVGNMHFSEGKKQI. . . SSKVYVDDQDLTDLRFIKQR
Query Conservation    



      
 
 
...   
 
   
   

 
   
Alig confidence 
















...



















Template Conservation       
 
  
     
      
 

  
  

  
   
Template Sequence  TKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVXN
Template Known Secondary structure  STTTTTTTT


T
Template Predicted Secondary structure 












Template SS confidence 







































   127..130.........140.........150.........160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions