Job Description P42909 Confidence 18.10% Date Thu Jan 5 12:02:06 GMT 2012 Rank 23 Aligned Residues 85 % Identity 16% Template c2yxxA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure analysis of diaminopimelate decarboxylate (lysa) Resolution 1.70 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		K	L	M	G	I	T	A	E	T	Y	G	F	G	I	R	F	F	T	I	E	K	T	I	N	V	I	G	K	A	A	P	H	Q	K	I	F	L	.	.	I	C	R	T	P	Q	T	V	R	K	L	V	E	G	G	I	D	L	K	D	V	N	V	G	N	M	H	F	S	E	G	K	K	Q	I	S	S	K	V	Y	V
Query Conservation																																							.	.
Alig confidence									.																														.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	L	K	I	L	R	.	E	E	G	F	G	X	D	V	V	T	K	G	E	L	L	A	A	K	L	A	G	V	P	S	H	T	V	V	W	N	G	N	G	K	S	R	D	Q	X	E	H	F	L	R	E	D	V	R	I	V	N	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									.		T	T							S										T	T			G	G	G						S													T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		52	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Q	D	L	T	D	L	R	F	I	K	Q	R	G	V	N	V	F	I	Q	D	V	P	G	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	E	E	X	E	I	W	R	E	L	N	P	E	G	V	E	Y	F	I	R	V	N	P	E	V	D
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions