Job Description P42909 Confidence 7.02% Date Thu Jan 5 12:02:06 GMT 2012 Rank 80 Aligned Residues 82 % Identity 12% Template c1dd9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core Resolution 1.60 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.												.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	V	I	G	K	A	A	P	H	Q	K	I	F	L	I	C	R	T	P	Q	T	V	R	K	L	V	E	G	G	I	D	L	K	D	V	N	V	G	N	M	H	F	S	E	G	K	K	Q	I	S	.	.	.	S	K	V	Y	V	.	.	.	.	.	.	.	.	.	.	.	D	D	Q	D	L	T	D	L	R	F
Query Conservation																																																					.	.	.						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																			.	.	.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		L	Y	E	A	Q	Q	D	N	A	E	P	N	R	L	L	V	V	E	G	Y	M	D	V	V	A	L	A	Q	Y	G	I	N	.	Y	A	V	A	S	L	G	S	T	T	A	D	H	I	Q	L	L	F	R	A	T	N	N	V	I	C	C	Y	D	G	D	R	A	G	R	D	A	A	W	R	A	L	E	T	A	L	P
Template Known Secondary structure								T		S	S		S						S	S										T	T			.																						S								S	S															G	G
Template Predicted Secondary structure																																		.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	Q	R	G	V	N	V	F	I	Q	D	V	P	G	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	M	T	D	G	R	Q	L	R	F	M	F	L	P	D	G	E
Template Known Secondary structure		G			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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