|   |
439 | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | |
|
|
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | |
. | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
T | H | T | A | Q | T | Q | T | H | L | N | F | T | Q | I | K | T | V | D | E | L | . |
. |
. |
N | Q | A | L | V | E | A | K | G | K | P | V | M | L | D | L | Y | A | D | W | C | V | A | C | . |
K | E | F | E | K | Y | T | F | S | D | P | Q | V | Q | K | A | L | A | D | T | V | L | L | Q | A | N | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
| . |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
| . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |
|   |   |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
S | G | N | A | R | I | G | K | P | A | P | D | F | K | A | T | A | V | V | D | G | A | F | K | E | V | K | L | S | D | Y | K | G | K | Y | V | V | L | F | F | Y | P | L | D | F | T | F | V | P | T | E | I | I | A | F | S | N | R | A | E | D | F | R | K | L | G | C | E | V | L | G | V | S | V | D | S | Q | F | T | H |
Template Known Secondary structure |   |
| T | T |
|
| T | T | S | B |
|
|
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G | G | T | T | S |  |  |  |  |  |  |
| S |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  | S | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | |
|
|
|
. | . | . | . | . | . | . | 560 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | T | A | N | D | A | Q | D | V | A | L | L | K | H | L | N | V | L | G | . |
. |
. |
. |
. |
. |
L | P | T | I | L | F | F | D | G | Q | G | Q | E | H | P | Q | A | R | V | T | G | F | M | D | . |
. |
. |
. |
A | E | T | F | S | A | H | L | R | D |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
| . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |
|
| . | . |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|
|
|
|   |
|   |
|
Template Sequence |   |
L | A | W | I | N | T | P | R | K | E | G | G | L | G | P | L | N | I | P | L | L | A | D | V | T | R | R | L | S | E | D | Y | G | V | L | K | T | D | E | G | I | A | Y | R | G | L | F | I | I | D | G | K | G | V | L | R | . |
. |
Q | I | T | V | N | D | L | P | V | G | R | S | V | D | E | A | L | R | L | V | Q | A |
Template Known Secondary structure |   |
 |  |  |  | T | S |
| G | G | G | T |
|
|
| S |
| S | S |
|  |  |  |
| T | T |
|  |  |  |  |  | T | T |
|  |  | T | T | T | T |  |  |
|  |  |  |  |  |  |
| T | T | S | B |  |  | . | . |  |  |  |  |  |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
  |   |
563 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
R | Q |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
F | Q |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
162 | . |
  |