Return to main results Retrieve Phyre Job Id

Job DescriptionP36655
Confidence99.38%DateThu Jan 5 11:53:30 GMT 2012
Rank71Aligned Residues97
% Identity28%Templatec3tcoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin (trxa-1); PDBTitle: crystallographic and spectroscopic characterization of sulfolobus2 solfataricus trxa1 provide insights into the determinants of3 thioredoxin fold stability
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   456...460.........470.........480.........490.........500.. .......510.........520.........530....
Predicted Secondary structure 













.











Query SS confidence 














































.































Query Sequence  VDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD. TVLLQANVTANDAQDVALLKHLNVLGLPTILF
Query Conservation        


   







 
 

  

 

  
     
   
  . 
 
  
 
        

   
  
 
   
Alig confidence 


































...








.










....
















Template Conservation 

   
   
     
 
 
   

  
       ...                
    ....        
   

   
Template Sequence  LTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIY. . . KKVAEKYKGKAVFGRLNVDEN. . . . QKIADKYSVLNIPTTLI
Template Known Secondary structure 

TTTSS
TT
...TTTTSTTT
....TT

SSS
Template Predicted Secondary structure 















...





....





Template SS confidence 















































































   33......40.........50.........60....... ..70.........80........ .90.........100.....
 
   535....540.........550.........560..
Predicted Secondary structure 











Query SS confidence 



























Query Sequence  FDGQGQEHPQARVTGFMDAETFSAHLRD
Query Conservation     

      
  
      
   
  
Alig confidence 
.





..

















Template Conservation   .  
   ..    
      
   
  
Template Sequence  F. VNGQLV. . DSLVGAVDEDTLESTVNK
Template Known Secondary structure  .TT..S


Template Predicted Secondary structure  .


..



Template SS confidence 



























   106 ...110.. .......120.........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions