Job Description P36655 Confidence 29.38% Date Thu Jan 5 11:53:30 GMT 2012 Rank 312 Aligned Residues 96 % Identity 11% Template c3ialB_ PDB info PDB header:ligase Chain: B: PDB Molecule:prolyl-trna synthetase; PDBTitle: giardia lamblia prolyl-trna synthetase in complex with prolyl-2 adenylate Resolution 2.20 Å

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		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.					.	.	540	.	.	.
Predicted Secondary structure																																																	.																							.	.	.	.
Query SS confidence																																																	.																							.	.	.	.
Query Sequence		K	P	V	M	L	D	L	Y	A	D	W	C	V	A	C	K	E	F	E	K	Y	T	F	S	D	P	Q	V	Q	K	A	L	A	D	T	V	L	L	Q	A	N	V	T	A	N	D	A	.	Q	D	V	A	L	L	K	H	L	N	V	L	G	L	P	T	I	L	F	F	D	G	.	.	.	.	Q	G	Q	E	H	P
Query Conservation																																																	.																							.	.	.	.
Alig confidence																																																	.																							.	.	.	.
Template Conservation
Template Sequence		H	V	V	I	I	P	I	G	C	G	K	K	N	N	Q	E	S	D	Q	Q	V	L	G	K	V	N	E	I	A	D	T	L	K	S	K	L	G	L	R	V	S	I	D	D	D	F	S	K	S	M	G	D	K	L	Y	Y	Y	E	L	K	G	V	P	L	R	I	E	V	G	Q	R	D	L	A	N	G	Q	C	I	V
Template Known Secondary structure		S							S		S		T	T																						T	T										T	T	S												T	T		S												T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		544	.	.	.	.	.	550						.	.	.	.	.	.	.	.																				.	560	.	.	.	.
Predicted Secondary structure									.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	R	V	T	G	F	.	.	.	.	.	M	D	A	E	T	F	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	R	D	R	Q
Query Conservation									.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	R	D	V	G	K	D	Q	K	R	V	I	P	I	T	E	V	M	K	V	S	S	H	T	T	E	N	H	E	L	V	V	K	N	V	I	K	D	E	L	D	A	Y	K
Template Known Secondary structure				T	T	T		G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions