|   |
442 | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | T | Q | T | H | L | N | F | T | Q | I | K | T | V | D | E | L | N | Q | A | L | V | E | A | K | G | K | P | V | M | L | D | L | Y | A | D | W | C | V | A | C | K | E | F | E | K | Y | T | F | S | D | P | Q | V | Q | K | A | L | A | D | T | V | L | L | Q | A | N | V | T | A | N | D | A | Q | D | V | A | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   | . |   |   |
Template Sequence |   |
A | L | N | L | P | Y | D | E | H | A | D | A | W | T | Q | V | K | K | A | L | A | A | G | K | R | T | H | K | P | T | L | L | V | F | G | A | N | W | C | T | D | C | R | A | L | D | K | S | L | R | N | Q | K | N | T | A | L | I | A | K | H | F | E | V | V | K | I | D | V | G | N | F | D | R | N | L | E | . |
L | S |
Template Known Secondary structure |   |
|
| S |
| S | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
| T | T | T | T | S | S |  |  | . |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
. | . |
  |
  |   |
522 | . | . | . | . | |
|
|
. | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 560 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | H | L | N | V | . |
. |
. |
L | G | L | P | T | I | L | F | F | D | G | Q | G | Q | E | H | P | Q | A | R | V | T | G | F | M | . |
. |
. |
. |
. |
. |
. |
D | A | E | T | F | S | A | H | L | R | D | R |
Query Conservation |   |
  |   |   |
|   | . | . | . |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|
|   |   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
Template Sequence |   |
Q | A | Y | G | D | P | I | Q | D | G | I | P | A | V | V | V | V | N | S | D | G | K | V | R | . |
. |
Y | T | T | K | G | G | E | L | A | N | A | R | K | X | S | D | Q | G | I | Y | D | F | F | A | K | I |
Template Known Secondary structure |   |
 |  | T | T |
| G | G | G | G |
| S | S |  |  |  |  |  |
| T | T | S |
|  |  | . | . |  |  |
|
| S |
| T | T | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
. | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |