Return to main results Retrieve Phyre Job Id

Job DescriptionP36655
Confidence25.68%DateThu Jan 5 11:53:30 GMT 2012
Rank322Aligned Residues105
% Identity7%Templatec3bj5A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:protein disulfide-isomerase; PDBTitle: alternative conformations of the x region of human protein disulphide-2 isomerase modulate exposure of the substrate binding b' domain
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   453......460.........470...... ...480.........490.........500.. .......510.........520........
Predicted Secondary structure 





..










.









.
Query SS confidence 























. .

























.

























.
Query Sequence  IKTVDELNQALVEAKGKPVMLDLY. . ADWCVACKEFEKYTFSDPQVQKALAD. TVLLQANVTANDAQDVALLKHLNVLG.
Query Conservation           


   







 ..
 

  

 

  
     
   
  . 
 
  
 
        

   
  
.
Alig confidence 























..












....








.










..












.
Template Conservation 
 
        

 
     



               ....   
   
 
  
  

    ..         

   
Template Sequence  VIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNF. . . . KTAAESFKGKILFAFIDSDHT. . DNQRILEFFGLKKE
Template Known Secondary structure 

TTTSSS



TTSSS....TTTTT

TT
G..GGTT

GG
Template Predicted Secondary structure 















....







..



Template SS confidence 















































































   220.........230.........240.........250........ .260.........270......... 280.........290...
 
   529530.........540.........550.........560...
Predicted Secondary structure  .














Query SS confidence  .


































Query Sequence  . LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR
Query Conservation  . 
   
   

      
  
      
   
  
Alig confidence  .


































Template Conservation    
 
 
                

 
 
  

 
 
Template Sequence  ECPAVRLITLEEEMTKYKPESEELTAERITEFCHRF
Template Known Secondary structure  G
S
SSS


S




Template Predicted Secondary structure 















Template SS confidence 



































   294.....300.........310.........320.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions