 |
Job Description | P36655 | Confidence | 99.03% | Date | Thu Jan 5 11:53:30 GMT 2012 |
Rank | 134 | Aligned Residues | 89 |
% Identity | 24% | Template | c1x5cA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:protein disulfide-isomerase; |
PDBTitle: the solution structure of the second thioredoxin-like2 domain of human protein disulfide-isomerase
|
Resolution | UNK |
|
 |
  |   |
467 | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | K | P | V | M | L | D | L | Y | A | D | W | C | V | A | C | K | E | F | E | K | Y | T | F | S | D | P | Q | V | Q | K | A | L | A | D | T | V | L | L | Q | A | N | V | T | A | N | D | A | Q | D | V | A | L | L | K | H | L | N | V | L | G | L | P | T | I | L | F | F | D | G | Q | G | Q | E | H | P | Q | A | R |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
| . |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
E | K | K | N | V | F | V | E | F | Y | A | P | W | C | G | H | C | K | Q | L | A | P | I | W | D | K | L | G | E | T | Y | K | D | H | E | N | I | V | I | A | K | M | D | S | T | A | N | . |
. |
. |
. |
. |
. |
E | V | E | A | V | K | V | H | S | F | P | T | L | K | F | F | . |
P | A | S | A | D | R | T | V | I | D |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S | S |
| S | S |  |  |  |  |  |  |  | T | T | T |
| . | . | . | . | . | . |
| B | T | T | B |
|
|
| S | S | S |  |  |  |  |  | . |
| S |
| S | S |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | |
. | . | . | 90 | . | . | . | . | . | . |
  |
  |   |
547 | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | G | F | M | D | A | E | T | F | S | A | H | L | R | D |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |
|   |
|   |   |
|
|   |   |
Template Sequence |   |
Y | N | G | E | R | T | L | D | G | F | K | K | F | L | E | S |
Template Known Secondary structure |   |
|
| S |
|
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|