Job Description P37650 Confidence 97.12% Date Wed Jan 25 15:20:52 GMT 2012 Rank 109 Aligned Residues 151 % Identity 15% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		959	960	.	.	.	.	.	.	.	.	.	970	.							.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		N	G	V	W	A	S	L	S	G	D	Q	L	T	.	.	.	.	.	.	G	K	N	V	E	D	N	W	R	V	R	W	M	T	G	Y	Y	Y	K	V	I	N	Q	N	N	R	R	V	T	I	G	L	N	N	M	I	W	H	Y	D	K	D	L	S	G	Y	S	L	G	Q	G	G	Y	Y	S	P	Q	E	Y	L	S
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																					.				.	.	.	.	.																									.	.	.	.
Template Conservation																																									.				.	.	.	.	.																									.	.	.	.
Template Sequence		W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	.	N	P	Y	.	.	.	.	.	V	G	F	E	M	G	Y	D	F	L	G	R	M	P	Y	K	G	S	V	E	N	G	A	Y	.	.	.	.	K	A	Q	G
Template Known Secondary structure															S	S	S			B	S	S					S	S													.	T	T	T	.	.	.	.	.												S		T	T		S	S				S			.	.	.	.
Template Predicted Secondary structure																																									.				.	.	.	.	.																									.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.
		1033	.	.	.	.	.	.	1040	.	.		.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		F	A	I	P	V	M	W	R	E	R	.	T	E	N	W	S	W	E	L	G	A	S	G	S	W	S	H	S	R	T	K	T	M	P	R	Y	P	L	M	N	L	I	P	T	D	W	Q	E	E	A	A	R	Q	S	N	D	G	G	S	S	Q	G	F	G	Y	T	A	R	A	L	L	E	R	R	V	T	S	N	W	F
Query Conservation												.
Alig confidence												.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A
Template Known Secondary structure												S	S	S	S																		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	B																					T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		1112	.	.	.	.	.	.	.	1120	.									.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		V	G	T	A	I	D	I	Q	Q	A	.	.	.	.	.	.	.	.	K	D	Y	A	P	S	H	F	L	L	Y	V	R	Y	S	A	A	G
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	L	E	Y	Q	F	T	N	N	I	G	D	A	H	T	I	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q
Template Known Secondary structure															B	T	T	T	T																		S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions