Return to main results Retrieve Phyre Job Id

Job DescriptionP37650
Confidence79.34%DateWed Jan 25 15:20:52 GMT 2012
Rank146Aligned Residues222
% Identity14%Templatec3qlbA_
PDB info PDB header:metal transportChain: A: PDB Molecule:enantio-pyochelin receptor; PDBTitle: enantiopyochelin outer membrane tonb-dependent transporter from2 pseudomonas fluorescens bound to the ferri-enantiopyochelin
Resolution3.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   821........830.........840.........850.........860.........870.........880.........890.........900
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  RMFFRSDFVNMNVGSFSTNADGKWDDNWGTCTLQDCSGNRSQSDSGASVAVGWRNDVWSWDIGTTPMGFNVVDVVGGISY
Query Conservation               
                               
              
 
 
          

   
Alig confidence 















































































Template Conservation                                                                      
     
 
   
Template Sequence  TVGGRQDRSSARTDNRMNDSGSKQDDEKFTYRTGLVYLADNGLAPYISYSTSFDPVLGTNFYGTPYKPTSAKQSEVGVKY
Template Known Secondary structure  TTTT

TTS


SB
SSS
B


Template Predicted Secondary structure 





































Template SS confidence 















































































   429430.........440.........450.........460.........470.........480.........490.........500........
 
   901........910.........920.........930.........940.........950.........960....... ..970
Predicted Secondary structure 































..........

Query SS confidence 


































































. . . . . . . . . .


Query Sequence  SDDIGPLGYTVNAHRRPISSSLLAFGGQKDSPSNTGKKWGGVRADGVGLSLSYDKGEANGVWASLSG. . . . . . . . . . DQL
Query Conservation                 
    
 

  
  
     
  

 
                         ..........   
Alig confidence 





































....
























..........


Template Conservation                                   
 
  ....   
 
                 
              
Template Sequence  QPPGIDSYITLSLFDLTQENVLTTDPAQRLNKIQTGEI. . . . NVRGIELEGKASLARGLDLLAALTYNDAEVSKSNNPLE
Template Known Secondary structure 

TTSS
SSSTT
....
TTSSS

TT
Template Predicted Secondary structure 

















....









Template SS confidence 















































































   509510.........520.........530.........540...... ...550.........560.........570.........580....
 
   971........980.........990.........1000.........1010.........1020.........1030.........1040. ....
Predicted Secondary structure 





























.....

Query SS confidence 






































































. . . . .



Query Sequence  TGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDKDLSGYSLGQGGYYSPQEYLSFAIPVMWRE. . . . . RTEN
Query Conservation   
 

  
       
            
  
          
    
 
 






 
     
     .....    
Alig confidence 






































.....












.












.....



Template Conservation   
  
   
         
                 
  .....             . 
   
    
           
Template Sequence  KGKRPTDTPEKMASLWADYTLPEGPLSGLGFGAGVRYIG. . . . . STEADAANTQRVP. SYTLLDAAVHYDFDKLIPAAKG
Template Known Secondary structure 




TT

S

SSTTTT
.....

STTS


.
GGGSSGGGTT
Template Predicted Secondary structure 
















.....





.









Template SS confidence 















































































   585....590.........600.........610.........620... ......630...... ...640.........650........
 
   1046...1050..
Predicted Secondary structure 
Query SS confidence 






Query Sequence  WSWELGA
Query Conservation         
Alig confidence 






Template Conservation    
 
 
Template Sequence  LRLAVNA
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   659660.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions