Job Description P37650 Confidence 98.28% Date Wed Jan 25 15:20:52 GMT 2012 Rank 91 Aligned Residues 219 % Identity 10% Template c3nf1A_ PDB info PDB header:motor protein, transport protein Chain: A: PDB Molecule:kinesin light chain 1; PDBTitle: crystal structure of the tpr domain of kinesin light chain 1 Resolution 2.80 Å

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		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.									.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.																															.
Query SS confidence																																											.	.	.	.	.	.	.	.																															.
Query Sequence		Q	R	Q	R	L	A	L	D	P	G	S	V	W	I	T	Y	R	L	S	Q	D	L	W	Q	A	G	Q	R	S	Q	A	D	T	L	M	R	N	L	A	Q	Q	.	.	.	.	.	.	.	.	K	S	N	D	P	E	Q	V	Y	A	Y	G	L	Y	L	S	G	H	D	Q	D	R	A	A	L	A	H	I	N	S	.
Query Conservation																																											.	.	.	.	.	.	.	.																															.
Alig confidence																																											.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		F	Q	G	G	G	Y	E	I	P	A	R	L	R	T	L	H	N	L	V	I	Q	Y	A	S	Q	G	R	Y	E	V	A	V	P	L	C	K	Q	A	L	E	D	L	E	K	T	S	G	H	D	H	P	D	V	A	T	M	L	N	I	L	A	L	V	Y	R	D	Q	N	K	Y	K	D	A	A	N	L	L	N	D	A
Template Known Secondary structure			S	S	S		T	T	S																	T	T																						S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
																																														555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	R	A	Q	W	N	S	N	I	Q	E	L	V	N	R	L	Q	S	D	Q	V	L	E	T	A	N	R	L	R	E	S	G	K	E	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	I	R	E	K	T	L	G	K	D	H	P	A	V	A	A	T	L	N	N	L	A	V	L	Y	G	K	R	G	K	Y	K	E	A	E	P	L	C	K	R	A	L	E	I	R	E	K	V	L	G	K	D	H	P	D	V	A	K	Q	L	N	N	L	A	L	L	C	Q	N	Q	G	K	Y	E	E	V	E	Y	Y
Template Known Secondary structure											T	T																	T	T	T																						T	T																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	A	M	L	R	Q	Q	P	P	S	T	R	I	D	L	T	L	A	D	W	A	Q	Q	R	R	D	Y	T	A	A	R	A	A	Y	Q	N	V	L	T	R	E	P	A	N	A	D	A	I	L	G	L	T	E	V	D	I	A	A	G	D	K	A	A	A	R	S	Q	L	A	K	L	P	A	T	D	N	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	R	A	L	E	I	Y	Q	T	K	L	G	P	D	D	P	N	V	A	K	T	K	N	N	L	A	S	C	Y	L	K	Q	G	K	F	K	Q	A	E	T	L	Y	K	E	I	L	T	R	A	H	E	R	E	F	G	K	P	I	W	M	H	A	E	E	R	E	E	C	T	S	F	G	E	Y	G	S	P	T	V
Template Known Secondary structure												T	S		T	T																			T																																						S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	Q	R	R	V	A	L	A	Q	A	Q	L	G	D	T	A	A	A	Q	R	T	F	N	K	L	I	P	Q	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	T	L	K	N	L	G	A	L	Y	R	R	Q	G	K	F	E	A	A	E	T	L	E	E	A	A	M	R	S	R	K
Template Known Secondary structure																T
Template Predicted Secondary structure
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions