Job Description P37650 Confidence 99.66% Date Wed Jan 25 15:20:52 GMT 2012 Rank 13 Aligned Residues 292 % Identity 12% Template c3hymB_ PDB info PDB header:cell cycle, ligase Chain: B: PDB Molecule:cell division cycle protein 16 homolog; PDBTitle: insights into anaphase promoting complex tpr subdomain2 assembly from a cdc26-apc6 structure Resolution 2.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	Q	Q	Q	L	L	E	Q	V	R	L	G	E	A	T	H	R	E	D	L	V	Q	Q	S	L	Y	R	L	E	L	I	D	P	N	N	P	D	V	V	A	A	R	F	R	S	L	L	R	Q	G	D	I	D	G	A	Q	K	Q	L	D	R	L	S	Q	L	A	P	S	S	N	A	Y	K	S	S	R	T	T	M
Query Conservation
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		E	N	L	D	V	V	V	S	L	A	E	R	H	Y	Y	N	C	D	F	K	X	C	Y	K	L	T	S	V	V	X	E	K	D	P	F	H	A	S	C	L	P	V	H	I	G	T	L	V	E	L	N	K	A	N	E	L	F	Y	L	S	H	K	L	V	D	L	Y	P	S	N	P	V	S	W	.	.	.	.	.	.
Template Known Secondary structure					T	T											T	T																	T	T		T	T	T												T																	T	T	S	T				.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	T	P	D	G	R	Q	A	L	Q	Q	A	R	L	Q	A	T	T	G	H	A	E	E	A	V	A	S	Y	N	K	L	F	N	G	A	P	P	E	G	D	I	A	V	E	Y	W	S	T	V	A	K	I	P	A	R	R	G	E	A	I	N	Q	L	K	R	I	N	A	D	A	P	G	N	T	G	L	Q	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	F	A	V	G	C	Y	Y	L	X	V	G	H	K	N	E	H	A	R	R	Y	L	S	K	A	T	T	L	E	K	T	Y	G	P	A	W	I	A	Y	G	H	S	F	A	V	E	S	E	H	D	Q	A	X	A	A	Y	F	T	A	A	Q	L	X	K	G	C	H	L	P	X	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.										S		S														T	T		T	T		T														T																T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	L	L	L	F	S	S	D	R	R	D	E	G	F	A	V	L	E	Q	M	A	K	S	N	A	G	R	E	G	A	S	K	I	W	Y	G	Q	I	K	D	M	P	V	S	D	A	S	V	S	A	L	K	K	Y	L	S	I	F	S	D	G	D	S	V	A	A	A	Q	S	Q	L	A	E	Q	Q	K	Q	L
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	G	L	E	Y	G	L	T	N	N	S	K	L	A	E	R	F	F	S	Q	A	L	S	I	A	P	E	D	P	F	V	X	H	E	V	G	V	V	A	F	Q	N	G	E	W	K	T	A	E	K	W	F	L	D	A	L	E	K	I	K	A	.	.	.	.	.	.	.	.	.	.	.	I	G	N	E	V	T	V
Template Known Secondary structure										T	T														T	T		T	T															T	T																	T	T	.	.	.	.	.	.	.	.	.	.	.	T	S		S		T	T
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.												.	.	.	.	.	440	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	P	A	F	R	A	R	A	Q	G	L	A	A	V	D	S	G	M	A	G	K	A	I	P	E	L	Q	Q	A	V	R	A	N	P	K	D	S	E	A	L	G	A	L	G	Q	A	Y	S	Q	K	G	D	R	A	N	A	V	A	N	L	E	K	A	L	A	L	D	P	H	S	S	N	N	D	K	W	N	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	W	E	P	L	L	N	N	L	G	H	V	C	R	K	L	K	K	Y	A	E	A	L	D	Y	H	R	Q	A	L	V	L	I	P	Q	N	A	S	T	Y	S	A	I	G	Y	I	H	S	L	X	G	N	F	E	N	A	V	D	Y	F	H	T	A	L	G	L	R	R	D	D	T	F	S	V	T	X	L	G
Template Known Secondary structure		T	T															T	T																S	T	T		S														T											T	T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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