Job Description P37650 Confidence 99.65% Date Wed Jan 25 15:20:52 GMT 2012 Rank 14 Aligned Residues 260 % Identity 13% Template c3cvpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:peroxisome targeting signal 1 receptor pex5; PDBTitle: structure of peroxisomal targeting signal 1 (pts1) binding2 domain of trypanosoma brucei peroxin 5 (tbpex5)complexed3 to pts1 peptide (10-skl) Resolution 2.00 Å

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		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	Q	A	E	A	L	E	N	Q	G	K	W	A	Q	A	A	A	L	Q	R	Q	R	L	A	L	D	P	G	S	V	W	I	T	Y	R	L	S	Q	D	L	W	Q	A	G	Q	R	S	Q	A	D	T	L	M	R	N	L	A	Q	Q	K	S	N	D	P	E	Q	V	Y	A	Y	G	L	Y	L	S	G	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	E	E	G	L	S	M	L	K	L	A	N	L	A	E	A	A	L	A	F	E	A	V	C	Q	A	A	P	E	R	E	E	A	W	R	S	L	G	L	T	Q	A	E	N	E	K	D	G	L	A	I	I	A	L	N	H	A	R	M	L	D	P	K	D	I	A	V	H	A	A	L	A	V	S	H	T	N	E	H
Template Known Secondary structure												T	T																	T	T															T	T																	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	R	A	A	L	A	H	I	N	S	L	P	R	A	Q	W	N	S	N	I	Q	E	L	V	N	R	L	Q	S	D	Q	V	L	E	T	A	N	R	L	R	E	S	G	K	E	A	E	A	E	A	M	L	R	Q	Q	P	P	S	T	R	I	D	L	T	L	A	D	W	A	Q	Q	R	R	D	Y	T	A	A	R
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	N	A	A	L	A	S	L	R	A	W	L	L	S	Q	P	Q	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	F	F	A	A	P	N	E	Y	R	E	C	R	T	L	L	H	A	A	L	E	M	N	P	N	D	A	Q	L	H	A	S	L	G	V	L	Y	N	L	S	N	N	Y	D	S	A	A
Template Known Secondary structure																T	S	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.				T	T	S																		S	T	T															T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.													.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y	Q	N	V	L	T	R	E	P	A	N	A	D	A	I	L	G	L	T	E	V	D	I	A	A	G	D	K	A	A	A	R	S	Q	L	A	K	L	P	A	T	D	N	A	S	L	N	T	Q	R	R	V	A	L	A	Q	A	Q	L	G	D	T	A	A	A	Q	R	T	F	N	K	L	I	P	Q	A	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	L	R	R	A	V	E	L	R	P	D	D	A	Q	L	W	N	K	L	G	A	T	L	A	N	G	N	R	P	Q	E	A	L	D	A	Y	N	R	A	L	D	I	N	P	G	Y	V	R	V	M	Y	N	M	A	V	S	Y	S	N	M	S	Q	Y	D	L	A	A	K	Q	L	V	R	A	I	Y	M	Q	V	T
Template Known Secondary structure												T	T															T	T																	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	P	S	M	E	S	A	M	V	L	R	D	G	A	K	F	E	A	Q	A	G	D	P	T	Q	A	L	E	T	Y	K	D	A	M	V	A	S	G
Query Conservation
Alig confidence				.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		R	S	.	.	.	.	.	.	.	M	W	D	F	F	R	M	L	L	N	V	M	N	R	P	D	L	V	E	L	T	Y	A	Q	N	V	E	P	F	A
Template Known Secondary structure				.	.	.	.	.	.	.												T	T								G	G	G	T		S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		614	.								.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions