Return to main results Retrieve Phyre Job Id

Job DescriptionP37650
Confidence22.92%DateWed Jan 25 15:20:52 GMT 2012
Rank176Aligned Residues43
% Identity12%Templatec3ai4A_
PDB info PDB header:fluorescent protein, replicationChain: A: PDB Molecule:yeast enhanced green fluorescent protein, dna polymerase PDBTitle: crystal structure of yeast enhanced green fluorescent protein - mouse2 polymerase iota ubiquitin binding motif fusion protein
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1113......1120.........1130.........1140.........1150.......
Predicted Secondary structure 





























Query SS confidence 












































Query Sequence  GTAIDIQQAKDYAPSHFLLYVRYSAAGWQGDMDLPPQPLIPYADW
Query Conservation 
          
       
  
                      
Alig confidence 

























..
















Template Conservation 

 
 
 
 
 
 
  
    
  

.. 





 


  

 
Template Sequence  GHKFSVSGEGEGDATYGKLTLKFICT. . TGKLPVPWPTLVTTFVQ
Template Known Secondary structure  TTTTTT..TSS
SS
GGGGTTT

G
Template Predicted Secondary structure 





..










Template SS confidence 












































   24.....30.........40......... 50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions