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Job DescriptionP37650
Confidence96.71%DateWed Jan 25 15:20:52 GMT 2012
Rank117Aligned Residues188
% Identity11%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   940.........950.........960.........970. ........980.........990.........1000.........1010..
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Query Sequence  GGVRADGVGLSLSYDKGEANGVWASLSGDQLT. . . . . . . GKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMIWHYDK
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Template Sequence  GKTKSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFATRDYSTHSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVSG
Template Known Secondary structure  TTSS




TT
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   1098.1100.........1110.........1120.........1130.........1140.........1150.........1160.........1170.......
 
   1013......1020.........1030.........1040... ......1050.........1060.........1070.........1080.........
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Query Sequence  DLSGYSLGQGGYYSPQEYLSFAIPVMWRERT. . . ENWSWELGASGSWSHSRTKTMPRYPLMNLIPTDWQEEAARQSNDGG
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Template Sequence  KQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFSGKWKVTARAGLGYQFDLLANGETV. . . . . . . . . . . LRDASGEKRIK
Template Known Secondary structure 

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   1181........1190.........1200.........1210.........1220.........1230........ .1240.........
 
   1090.........1100.........1110.........1120.... .....1130........
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Query Sequence  SSQGFGYTARALLERRVTSNWFVGTAIDIQQAKDY. APSHFLLYVRYSAA
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Template Sequence  GEKDSRMLMSVGLNAEIRDNVRFGLEFEKSAFGKYNVDNAVNANFRYSFG
Template Known Secondary structure  SSTTT
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   1252.......1260.........1270.........1280.........1290.........1300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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