Job Description P37650 Confidence 98.39% Date Wed Jan 25 15:20:52 GMT 2012 Rank 84 Aligned Residues 174 % Identity 11% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.									.	1030	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.
Query Sequence		G	V	W	A	S	L	S	G	D	Q	L	T	G	K	N	V	E	D	N	W	R	V	R	W	M	T	G	Y	Y	Y	K	V	I	N	Q	N	N	R	R	V	T	I	G	L	N	N	M	I	W	H	Y	D	K	D	L	S	G	Y	S	L	G	Q	G	G	Y	Y	S	P	Q	.	.	.	.	.	.	.	.	E	Y	L
Query Conservation																																																																							.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.					.																																																	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.					.
Template Sequence		T	W	Y	A	G	G	K	L	G	W	S	Q	.	.	.	.	Y	H	D	T	.	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	F	K	A	Q
Template Known Secondary structure												S		.	.	.	.				S	.						S				S				S																	T	T																		S	S				S	S
Template Predicted Secondary structure														.	.	.	.					.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		1032	.	.	.	.	.	.	.	1040	.	.		.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		S	F	A	I	P	V	M	W	R	E	R	.	T	E	N	W	S	W	E	L	G	A	S	G	S	W	S	H	S	R	T	K	T	M	P	R	Y	P	L	M	N	L	I	P	T	D	W	Q	E	E	A	A	R	Q	S	N	D	G	G	S	S	Q	G	F	G	Y	T	A	R	A	L	L	E	R	R	V	T	S	N	W
Query Conservation													.
Alig confidence													.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I
Template Known Secondary structure													S	S	S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S	S	S																						S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		1111	.	.	.	.	.	.	.	.	1120	.									.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.		.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																															.
Query SS confidence													.	.	.	.	.	.	.	.																															.
Query Sequence		F	V	G	T	A	I	D	I	Q	Q	A	.	.	.	.	.	.	.	.	K	D	Y	A	P	S	H	F	L	L	Y	V	R	Y	S	A	A	G	W	Q	G	D	M	D	L	P	P	Q	P	L	.	I	P
Query Conservation													.	.	.	.	.	.	.	.																															.
Alig confidence													.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	E	D	A	A	P	V	V	A	P	A	P	A	P	A	P
Template Known Secondary structure								S	S		S	S					S					S	S		S																					S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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