Job Description P37650 Confidence 89.46% Date Wed Jan 25 15:20:52 GMT 2012 Rank 135 Aligned Residues 165 % Identity 14% Template c2iwvD_ PDB info PDB header:ion channel Chain: D: PDB Molecule:outer membrane protein g; PDBTitle: structure of the monomeric outer membrane porin ompg in the2 open and closed conformation Resolution 2.3 Å

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		941	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.				980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		G	V	R	A	D	G	V	G	L	S	L	S	Y	D	K	G	E	A	N	G	V	W	A	S	L	S	G	D	Q	L	T	G	K	N	V	E	D	N	W	.	.	.	R	V	R	W	M	T	G	Y	Y	Y	K	V	I	N	Q	N	N	R	R	V	T	I	G	L	N	N	M	I	W	H	Y	D	K	D	L	S	G	Y
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.												.					.	.	.								.											.
Template Conservation																																																							.					.	.	.								.											.
Template Sequence		N	M	Q	R	W	K	I	A	P	D	W	D	V	K	L	T	D	D	L	R	F	N	G	W	L	S	M	Y	K	F	A	N	D	L	N	T	T	G	Y	A	D	T	R	V	E	T	E	T	G	L	Q	Y	T	.	F	N	E	T	.	.	.	V	A	L	R	V	N	Y	.	Y	L	E	R	G	F	N	M	D	D	.
Template Known Secondary structure																	S	S	S														S									S													.		S	S	S	.	.	.	B							.								S	S	T	.
Template Predicted Secondary structure																																																							.					.	.	.								.											.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.				.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.
		1018	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	G	Q	G	G	Y	Y	S	P	Q	E	Y	L	S	F	A	I	P	V	M	W	R	E	R	T	E	N	W	S	W	E	L	G	A	S	G	S	W	S	H	S	R	T	K	T	M	P	R	Y	P	L	M	N	L	I	P	T	D	W	Q	E	E	A	A	R	Q	S	N	D	G	G	S	S	Q	G	F	G	Y	T
Query Conservation
Alig confidence		.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	R	N	N	G	E	F	S	T	Q	E	I	R	A	Y	L	P	L	T	L	G	N	H	S	V	T	P	Y	T	R	I	G	L	D	R	W	S	N	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	Q	D	D	I	E	R	E	G	H	D	F	N	R
Template Known Secondary structure		.	.	.	.	.	.	T			T	T																T	T																	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.																					.	.	.	.	.	.	.	.	230	.	.	.	.	.
		1098	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.					1120	.	.	.	.	.	.	.	.	.		1130	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.											.
Query SS confidence																								.	.	.	.											.
Query Sequence		A	R	A	L	L	E	R	R	V	T	S	N	W	F	V	G	T	A	I	D	I	Q	.	.	.	.	Q	A	K	D	Y	A	P	S	H	F	.	L	L	Y	V	R	Y	S	A
Query Conservation																								.	.	.	.											.
Alig confidence																								.	.	.	.											.
Template Conservation
Template Sequence		V	G	L	F	Y	G	Y	D	F	Q	N	G	L	S	V	S	L	E	Y	A	F	E	W	Q	D	H	D	E	G	D	S	D	K	F	H	Y	A	G	V	G	V	N	Y	S	F
Template Known Secondary structure											S	S	S															S	S	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions