Job Description P37650 Confidence 29.77% Date Wed Jan 25 15:20:52 GMT 2012 Rank 167 Aligned Residues 96 % Identity 16% Template c1qgc1_ PDB info PDB header:virus/immune system Chain: 1: PDB Molecule:protein (virus capsid protein); PDB Fragment:residues 133-156 PDBTitle: structure of the complex of an fab fragment of a neutralizing antibody2 with foot and mouth disease virus Resolution 30.00 Å

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		1048	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	L	G	A	S	G	S	W	S	H	S	R	T	K	T	M	P	R	Y	P	L	M	N	L	I	P	T	D	W	Q	E	E	A	A	R	Q	S	N	D	G	G	S	S	Q	G	F	G	Y	T	A	R	A	L	L	E	R	R	V	T	S	N	W	F	V	G	T	A	I	D	I	Q	Q	A	K	D	Y	A	P	S
Query Conservation
Alig confidence																.	.													.																.	.																												.	.
Template Conservation																.	.													.																.	.																												.	.
Template Sequence		Y	F	S	D	L	E	I	A	V	T	H	T	G	K	.	.	L	T	W	V	P	N	G	A	P	V	S	A	.	L	N	N	T	T	N	P	T	A	Y	H	K	G	P	V	.	.	T	R	L	A	L	P	Y	T	A	P	H	R	V	L	A	T	A	Y	T	G	T	S	F	N	F	G	A	.	.	V	K	A	E	T
Template Known Secondary structure																.	.						T	T			G	G	G	.	G	G		T	T	S	S						S	S		.	.										S	S	S	S			S								S				.	.
Template Predicted Secondary structure																.	.													.																.	.																												.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	L	L	Y	V	R	Y	S	A	A	G	W	Q	G	D	M	D	L	P	P	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	T	E	L	L	V	R	M	K	R	A	E	L	Y	C	P	R	P	I	L	P	I	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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