Return to main results Retrieve Phyre Job Id

Job DescriptionP37650
Confidence26.67%DateWed Jan 25 15:20:52 GMT 2012
Rank170Aligned Residues165
% Identity12%Templatec1po3A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:iron(iii) dicitrate transport protein feca PDBTitle: crystal structure of ferric citrate transporter feca in2 complex with ferric citrate
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   885....890.........900.........910.........920.........930.. .......940.........950.........960...
Predicted Secondary structure 
























.













Query SS confidence 















































.






























Query Sequence  TPMGFNVVDVVGGISYSDDIGPLGYTVNAHRRPISSSLLAFGGQKDSP. SNTGKKWGGVRADGVGLSLSYDKGEANGVWA
Query Conservation 
          

                  
    
 

  
  
  .   
  

 
                     
Alig confidence 















































.






























Template Conservation     
          
              
       
                                          
Template Sequence  SGNVEPEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQARYDLGTLTPTLDNVSIYA
Template Known Secondary structure  TSS



SSS





TTTT






TTSS
GGGTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   529530.........540.........550.........560.........570.........580.........590.........600........
 
   964... ..970.........980.........990.........1000....... ..1010.........1020.........1030..
Predicted Secondary structure  ........















...















Query SS confidence 



. . . . . . . .







































. . .
























Query Sequence  SLSG. . . . . . . . DQLTGKNVEDNWRVRWMTGYYYKVINQNNRRVTIGLNNMI. . . WHYDKDLSGYSLGQGGYYSPQEYLS
Query Conservation      ........    
 

  
       
            
  
     ...     
    
 
 






 
  
Alig confidence 



........























.....










...
























Template Conservation                  
  
   
         
  .....          
                         
  
Template Sequence  SYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKP. . . . . GNWTFNLNSDFQSSQFADNANTVKESADGSTGRIPGFML
Template Known Secondary structure 
SSSTTTT
B
SS

SB
S.....TT

B
SSTT


S

SSSSSS
B

Template Predicted Secondary structure 















.....
















Template SS confidence 















































































   609610.........620.........630.........640.... .....650.........660.........670.........680...
 
   1033......1040.........1050....
Predicted Secondary structure 

Query SS confidence 





















Query Sequence  FAIPVMWRERTENWSWELGASG
Query Conservation     
                  
Alig confidence 





















Template Conservation   

   
          
 
 
Template Sequence  WGARVAYDFGPQMADLNLAFGV
Template Known Secondary structure  S
TTTT

Template Predicted Secondary structure 





Template SS confidence 





















   684.....690.........700.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions