Job Description P24554 Confidence 99.90% Date Thu Jan 5 11:41:40 GMT 2012 Rank 30 Aligned Residues 223 % Identity 22% Template d1nlfa_ SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Resolution 1.95

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	A	K	V	Q	K	L	S	D	I	S	L	E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	.	.	.	.	.	.	.	.	.	.	.	T	L	Y
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.														.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.														.
Template Sequence		A	T	H	K	P	I	N	I	L	E	.	.	.	.	.	.	.	A	F	A	A	A	P	P	P	L	D	Y	V	L	.	P	N	M	V	A	G	T	V	G	A	L	V	S	P	G	G	A	G	K	S	M	L	A	L	Q	L	A	A	Q	I	A	G	G	P	D	L	L	E	V	G	E	L	P	T	G	P	V	I	Y
Template Known Secondary structure												.	.	.	.	.	.	.				S										.	T	T			T	T	S							S	T	T	S	S														T				T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.														.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.								.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.									.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	.	.	.	.	.	.	.	.	.	N	L	N	M	L	S	E	T	S	.	.	.	.	.	.	.	.	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S
Query Conservation																								.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		L	P	A	E	D	P	P	T	A	I	H	H	R	L	H	A	L	G	A	H	L	S	A	E	E	R	Q	A	V	A	D	G	L	L	I	Q	P	L	I	G	S	L	P	N	I	M	A	P	E	W	F	D	G	L	K	R	A	A	E	G	R	R	L	M	V	L	D	T	L	R	R	F	.	.	.	.	H	I	E	E
Template Known Secondary structure				S	S	S														T	T	S																		T	T	S				T	T	S												T	T		S							G	G	G	G	.	.	.	.			S
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.					.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	.	.	.	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L
Query Conservation																																																						.	.	.
Alig confidence																																																						.	.	.
Template Conservation
Template Sequence		E	N	A	S	G	P	M	A	Q	V	I	G	R	M	E	A	I	A	A	D	T	G	C	S	I	V	F	L	H	H	A	V	L	V	D	N	I	R	W	Q	S	Y	L	S	S	M	T	S	A	E	A	E	E	W	G	V	D	D	D	Q	R	R	F	F	V	R	F	G	V	S	K	A	N	Y	G	A	P	F	A	D
Template Known Secondary structure		T	T																															T	G	G	G		S																T	T			T	T	S	G	G	G										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	A	M	T	E	Q	G	L	R	E	V	S	N	P	S	A	I	F	L	S	R	G	D	E	V	T	S
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		R	W	F	R	R	H	D	G	G	.	.	.	V	L	K	P	A	V	L	E	R	Q	R	K	S	K	G	V	P
Template Known Secondary structure								G	G	G	.	.	.											S	S		S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions