 |
Job Description | P24554 | Confidence | 97.96% | Date | Thu Jan 5 11:41:40 GMT 2012 |
Rank | 77 | Aligned Residues | 107 |
% Identity | 20% | Template | d1fx0a3 |
SCOP info | P-loop containing nucleoside triphosphate hydrolases
| P-loop containing nucleoside triphosphate hydrolases
| RecA protein-like (ATPase-domain)
|
Resolution | 3.20 |
|
 |
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
L | P | R | F | S | T | G | F | K | E | F | D | R | V | L | G | G | G | V | V | P | G | S | A | I | L | I | G | G | N | P | G | A | G | K | S | T | L | L | L | Q | T | L | C | K | . |
L | A | Q | Q | M | K | T | L | Y | V | T | G | E | E | S | L | Q | Q | V | A | M | R | A | H | R | L | . |
. |
. |
G | L | P | T | D |
Query Conservation |   |
  |   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   | . |
|
|   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |
|
| . | . | . |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
| . | . |
|
|
|
|
|
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | E | P | L | Q | T | G | L | I | A | I | D | A | M | I | P | . |
. |
V | G | R | G | Q | R | E | L | I | I | G | D | R | Q | T | G | K | T | A | V | A | T | D | T | I | L | N | Q | Q | G | Q | N | V | I | C | V | Y | V | A | I | G | Q | K | A | S | S | V | A | Q | V | V | T | N | F | Q | E | R | G | A | M | E | Y |
Template Known Secondary structure |   |
| S | B |
|
|
| S |
| T | T | T | T | T | T | S |
| . | . |
| B | T | T |
| B |
| B |  |  |  | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | T |
|  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  | T | G | G | G | T | G | G | G | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
  |
  |   |
150 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | L | N | M | L | S | E | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | Q | I | C | L | I | A | E | E | E | Q | P | K | L | M | V | I | D | S | I | Q | V | M |
Query Conservation |   |
  |
|   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|
|   |
Template Sequence |   |
T | I | V | V | A | E | T | A | D | S | P | A | T | L | Q | Y | L | A | P | Y | T | G | A | A | L | A | E | Y | F | M | Y | R | E | R | H | T | L | I | I | Y | D | D | L | S | K | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T | S |
| G | G | G | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
222 | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|