Job Description P24554 Confidence 97.29% Date Thu Jan 5 11:41:40 GMT 2012 Rank 172 Aligned Residues 107 % Identity 16% Template c3u5zM_ PDB info PDB header:dna binding protein/dna Chain: M: PDB Molecule:dna polymerase accessory protein 44; PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog Resolution 3.50 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Q	K	L	S	D	I	S	L	E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A
Query Conservation
Alig confidence																.	.	.	.	.												.																												.	.
Template Conservation																.	.	.	.	.												.																												.	.
Template Sequence		R	P	S	T	I	D	E	C	I	L	P	A	F	D	.	.	.	.	.	K	E	T	F	K	S	I	T	S	K	G	.	K	I	P	H	I	I	L	H	S	P	S	P	G	T	G	K	T	T	V	A	K	A	L	C	H	D	V	.	.	N	A	D	M	M	F	V	N	G	S	D	C	K	I	D	F	V	R	G	P
Template Known Secondary structure				S	S	T	T	T	S							.	.	.	.	.											S	.	S									S	S	S		S	S												T	.	.	T								G	G	G								T
Template Predicted Secondary structure																.	.	.	.	.												.																												.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		142	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.															.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.															.	.	.	.	.	.	.
Query Sequence		H	R	L	.	.	.	.	.	.	G	L	P	T	D	N	L	N	M	L	S	E	T	S	.	.	.	.	.	.	.	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V	I
Query Conservation					.	.	.	.	.	.															.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	N	F	A	S	A	A	S	F	D	G	R	Q	K	V	I	V	I	D	E	F	D	R	S	G	L	A	E	S	Q	R	H	L	R	S	F	M	E	A	Y	S	S	N	C	S	I	I
Template Known Secondary structure								S			T	T										S				G	G	G														T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions