Return to main results Retrieve Phyre Job Id

Job DescriptionP24554
Confidence95.69%DateThu Jan 5 11:41:40 GMT 2012
Rank396Aligned Residues91
% Identity16%Templatec3oiyB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:reverse gyrase helicase domain; PDBTitle: helicase domain of reverse gyrase from thermotoga maritima
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.... .....120.........130. ........140.........150........
Predicted Secondary structure 









.






.









...........
Query SS confidence 






















.
















.


























. . . . . . . . . . .
Query Sequence  VVPGSAILIGGNPGAGKSTLLLQ. TLCKLAQQMKTLYVTGE. ESLQQVAMRAHRLGLPTDNLNMLSETS. . . . . . . . . . .
Query Conservation 
  
 



 
 










.

  

 
  






.

  

  

 


     
 
  
  ...........
Alig confidence 






















.
















.


























...........
Template Conservation      
  

 







                 




   
  
    
                            
Template Sequence  IVQGKSFTMVAPTGVGKTTFGMMTALWLARKGKKSALVFPTVTLVKQTLERLQKLADEKVKIFGFYSSMKKEEKEKFEKS
Template Known Secondary structure  TTT




SS
TTTTT

SS

SS



TTS
Template Predicted Secondary structure 
























Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   159160.........170.........180..
Predicted Secondary structure  ...............




Query SS confidence  . . . . . . . . . . . . . . .























Query Sequence  . . . . . . . . . . . . . . . IEQICLIAEEEQPKLMVIDSIQVM
Query Conservation  ...............
  
   
      









Alig confidence  ...............























Template Conservation                                




 
 
Template Sequence  FEEDDYHILVFSTQFVSKNREKLSQKRFDFVFVDDVDAV
Template Known Secondary structure  T

S
TT


SS
Template Predicted Secondary structure 

















Template SS confidence 






































   170.........180.........190.........200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions