Job Description P24554 Confidence 94.43% Date Thu Jan 5 11:41:40 GMT 2012 Rank 467 Aligned Residues 91 % Identity 16% Template c3l9oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome Resolution 3.39 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160
Predicted Secondary structure																									.																						.	.	.	.	.																								.	.	.	.	.
Query SS confidence																									.																						.	.	.	.	.																								.	.	.	.	.
Query Sequence		V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	.	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	.	.	.	.	.	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	T	S	.	.	.	.	.	I	E
Query Conservation																									.																						.	.	.	.	.																								.	.	.	.	.
Alig confidence																									.																						.	.	.	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		I	D	R	G	E	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G	D	V	G	L	M	T	G	D	I	T	I	N	P	D	A	G	C	L	V	M	T	T	E
Template Known Secondary structure			T	T	T									S	S	S																T	T								S	S															T	S	S						S	S		B				S		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		161	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		Q	I	C	L	I	A	E	E	E	Q	.	.	.	.	.	P	K	L	M	V	I	D	S	I	Q	V	M
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.
Template Conservation
Template Sequence		I	L	R	S	M	L	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M
Template Known Secondary structure											S	S												T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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