Job Description P24554 Confidence 99.90% Date Thu Jan 5 11:41:40 GMT 2012 Rank 31 Aligned Residues 203 % Identity 15% Template c3hr8A_ PDB info PDB header:recombination Chain: A: PDB Molecule:protein reca; PDBTitle: crystal structure of thermotoga maritima reca Resolution 1.95 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																								.																																.
Query SS confidence																								.																																.
Query Sequence		D	I	S	L	E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	.	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	.	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G
Query Conservation																								.																																.
Alig confidence																								.																																.																	.	.
Template Conservation																																																																									.	.
Template Sequence		E	T	Q	V	Q	P	V	E	V	I	P	T	G	S	L	A	I	D	I	A	T	G	V	G	G	Y	P	R	G	R	I	V	E	I	F	G	Q	E	S	S	G	K	T	T	L	A	L	H	A	I	A	E	A	Q	K	M	G	G	V	A	A	F	I	D	A	E	H	A	L	D	P	.	.	V	Y	A	K	N	L	G
Template Known Secondary structure			S											S								T	S	S	S	S			T	T								S	T	T	S	S															T	T								S	S						.	.							T
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110
		146	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure															.	.	.	.																											.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																											.	.	.	.	.	.	.
Query Sequence		L	P	T	D	N	L	N	M	L	S	E	T	S	.	.	.	.	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	.	.	.	.	.	.	.	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A
Query Conservation															.	.	.	.																											.	.	.	.	.	.	.
Alig confidence															.	.	.	.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	L	K	S	L	L	I	S	Q	P	D	H	G	E	Q	A	L	E	I	V	D	E	L	V	R	S	G	V	V	D	L	I	V	V	D	S	V	A	A	L	V	P	R	A	E	I	E	G	A	M	G	D	M	Q	V	G	L	Q	A	R	L	M	S	Q	A	L	R	K	I	A	G	S	V	N	K	S	K	A	V
Template Known Secondary structure				G	G	G							S	S														T	S			S							T	T	T								T	T				S	S		S	S																			T	S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		215	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.									.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		I	V	M	V	G	H	V	T	K	D	G	S	.	.	.	.	.	.	.	.	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	.	.	.	.	.	.	.	.	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M
Query Conservation														.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	F	T	N	Q	I	R	M	K	I	G	V	M	F	G	S	P	E	T	T	T	G	G	L	A	L	K	F	Y	A	T	M	R	M	E	V	R	R	G	E	P	I	K	E	G	K	D	V	I	G	N	V	I	S	V	K	I	V	K	N	K	V	A	P	P	F	K	T	A	Q	T	Y	I
Template Known Secondary structure								S	S	S		S	S	S	S	S		S		S	S		T										S														T	T															S	S	S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions