Job Description P24554 Confidence 97.83% Date Thu Jan 5 11:41:40 GMT 2012 Rank 95 Aligned Residues 120 % Identity 25% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.																	.
Query SS confidence																																											.	.	.																	.
Query Sequence		V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	.	.	.	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	.	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E
Query Conservation																																											.	.	.																	.
Alig confidence																																											.	.	.																	.
Template Conservation
Template Sequence		I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	K	P	S	S	G	R	I	L	F	D	N	K	P	I	D	Y	S	R	K	G	I	M	K	L	R	E	S	I	G	I	V	F	Q	D	P	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A
Template Known Secondary structure				T	T	S								T	T	S	S									T	T	S	S			S							T	T						S										S						S	S	G	G	G	T			S	S	B
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		168	.																																																	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.
Template Sequence		V	N	M	K	L	P	E	D	E	I	R	K	R	V	D	N	A	L	K	R	T	G	I	E	H	L	K	D	K	P	T	H	C	L	S	F	G	Q	K	K	R	V	A	I	A	G	V	L	V	M	E	P	K	V	L	I	L	D	E	P	.	.	.	.	.	.	.	.	.	T	A	G	L	D	P	M	G	V	S	E
Template Known Secondary structure			T	S																		T	T		G	G	G	T	T	S	B	G	G	G	S															T	T			S							T	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H
Template Known Secondary structure																						S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions