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Job DescriptionP24554
Confidence98.24%DateThu Jan 5 11:41:40 GMT 2012
Rank48Aligned Residues137
% Identity26%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   92.......100.........110.........120.........130.. .......140.........150.........160.......
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Query Sequence  VVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEE. . . . SLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAE
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Template Sequence  VPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPL
Template Known Secondary structure 
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STTSSTTSS

STT
TT


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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   168. 170.........180.........190.........
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Query Sequence  EE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QPKLMVIDSIQVMHMADVQSSPGSVAQVRE
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Template Sequence  ELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEA. . . . . . . . . TSALDPATTRS
Template Known Secondary structure  TTT

TTSTTTTTSS
BS


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   108.110.........120.........130.........140.........150.........160....... ..170........
 
   200.........210.........220.........230.........240.....
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Query Sequence  TAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDG
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Template Sequence  ILELLKDINRRLGLTILLITH. . . . . . . . EMDVVKRICDCVAVISN
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   179180.........190......... 200.........210......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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