Job Description P24554 Confidence 99.79% Date Thu Jan 5 11:41:40 GMT 2012 Rank 40 Aligned Residues 197 % Identity 23% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																	.																										.
Query SS confidence																																	.																										.
Query Sequence		G	V	A	K	V	Q	K	L	S	D	I	S	L	E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	.	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	.	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q
Query Conservation																																	.																										.
Alig confidence																																	.																										.
Template Conservation
Template Sequence		G	K	G	S	I	M	R	L	G	E	D	R	S	M	D	V	E	T	I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P
Template Known Secondary structure			T	T	S	S			S	S													S		S	S					S	S	S	S	S			T	T	S								T	T	S	S														T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		3022	.	.	.	.	.	.	.	3030	.	.	.	.	.	.	.	.	.	3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	.	.	.	.	A	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G
Query Conservation																															.	.	.	.
Alig confidence				.	.																										.	.	.	.																		.	.	.	.	.	.	.
Template Conservation				.	.																																															.	.	.	.	.	.	.
Template Sequence		I	Y	.	.	A	R	K	L	G	V	D	I	D	N	L	L	C	S	Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	.	.	.	.	.	.	.	T	P	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N
Template Known Secondary structure				.	.					T			G	G	G				B			S	S														S	S	S							T	T	G	G	G		.	.	.	.	.	.	.				T	T	T	T
Template Predicted Secondary structure				.	.																																															.	.	.	.	.	.	.
Template SS confidence
		3102	.			.	.	.	.	.	.	3110	.	.	.	.	.	.	.	.	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.								3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.								.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.											.
Query SS confidence																																	.	.	.	.	.	.	.											.
Query Sequence		V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	.	.	.	.	.	.	.	D	G	D	A	D	S	R	F	R	T	.	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M
Query Conservation																																	.	.	.	.	.	.	.											.
Alig confidence										.	.	.	.	.	.	.	.																.	.	.	.	.	.	.											.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		T	L	L	I	F	I	N	Q	.	.	.	.	.	.	.	.	G	G	N	A	L	K	F	Y	A	S	V	R	L	D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I
Template Known Secondary structure										.	.	.	.	.	.	.	.			S	T						S												B	S	S	S		B													S	S	S			S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		3187	.	.	3190	.	.	.	.									.	.	.	.	.	3200	.	.	.	.	.	.	.	.	.	3210	.	.	.	.	.	.	.	.	.	3220	.	.	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions