Job Description P24554 Confidence 97.48% Date Thu Jan 5 11:41:40 GMT 2012 Rank 160 Aligned Residues 107 % Identity 12% Template c3a5dM_ PDB info PDB header:hydrolase Chain: M: PDB Molecule:v-type atp synthase beta chain; PDBTitle: inter-subunit interaction and quaternary rearrangement2 defined by the central stalk of prokaryotic v1-atpase Resolution 4.80 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.
Predicted Secondary structure																																																	.	.	.	.	.																									.	.	.
Query SS confidence																																																	.	.	.	.	.																									.	.	.
Query Sequence		L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	.	.	.	.	.	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	.	.	.	G
Query Conservation																																																	.	.	.	.	.																									.	.	.
Alig confidence																		.	.																														.	.	.	.	.																									.	.	.
Template Conservation																		.	.
Template Sequence		E	Q	F	I	Q	T	G	I	S	T	I	D	V	M	N	T	.	.	L	V	R	G	Q	K	L	P	I	F	S	G	S	G	L	P	A	N	E	I	A	A	Q	I	A	R	Q	A	T	V	R	P	K	E	E	P	F	A	V	V	F	A	A	M	G	I	T	Q	R	E	L	S	Y	F	I	Q	E	F	E	R	T	G
Template Known Secondary structure			S	B		B		S						T	T	S		.	.		B	T	T		B							T	T	S														B						S																											S
Template Predicted Secondary structure																		.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.														.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		L	P	T	D	N	L	N	M	L	S	E	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	Q	I	C	L	I	A	.	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		A	L	S	R	S	V	L	F	L	N	K	A	D	D	P	T	I	E	R	I	L	T	P	R	M	A	L	T	V	A	E	Y	L	A	F	E	H	D	Y	H	V	L	V	I	L	T	D	M	T	N	Y
Template Known Secondary structure		G	G	G	G								T	T	S																							S										T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions