Job Description P24554 Confidence 99.91% Date Thu Jan 5 11:41:40 GMT 2012 Rank 25 Aligned Residues 201 % Identity 21% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.													.	.
Query SS confidence																																																			.	.	.	.	.	.	.													.	.
Query Sequence		E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	.	.	.	.	.	.	.	Q	Q	M	K	T	L	Y	V	T	G	E	E	.	.	S	L	Q	Q	V	A	M	R	A	H
Query Conservation																																																			.	.	.	.	.	.	.													.	.
Alig confidence																																																			.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		K	M	V	F	H	I	T	T	G	S	Q	E	F	D	K	L	L	G	G	G	I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	G	G	Y	P	G	G	K	I	I	F	I	D	T	E	N	T	F	R	P	D	R	L	R	D	I	A	D
Template Known Secondary structure		T	T							S						T	T	T	T	S	S			S	S	S								S	S		T												T	T	S		B	T	T	T	B										S	S	S											G	G
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		143	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.										170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																							.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence							.	.	.	.																							.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		R	L	G	L	P	.	.	.	.	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	E	.	.	.	.	.	.	.	.	.	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	.	.	.	Q	V	R	E	T	A	A	Y	L	T	R
Query Conservation							.	.	.	.																							.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence							.	.	.	.																							.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		R	F	N	V	D	H	D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L	Q	K
Template Known Secondary structure		G	G	T							T	T	S								S	T	T																S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M	T	E	Q	G	L	R	E	V	S	N
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																			.																	.
Template Conservation																			.	.	.	.	.	.	.	.																			.																	.
Template Sequence		I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	.	.	.	.	.	.	.	.	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R	G	E	.	L	R	I	A	K	I	Y	D	S	P	E	M	P	E	N	E	.	A	T	F	A	I	T	A	G	G	I	G	D	A	K	E
Template Known Secondary structure						T	T												.	.	.	.	.	.	.	.					S	S	S								S	S	T	T	.							S	S		T	T			S	S		.							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																			.																	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.									.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions