Job Description P24554 Confidence 94.71% Date Thu Jan 5 11:41:40 GMT 2012 Rank 460 Aligned Residues 112 % Identity 15% Template c2qeqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit; PDBTitle: crystal structure of kunjin virus ns3 helicase Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		96	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																.						.																.																												.	.	.	.
Query SS confidence																.						.																.																												.	.	.	.
Query Sequence		S	A	I	L	I	G	G	N	P	G	A	G	K	S	.	T	L	L	L	Q	.	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	.	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	.	.	.	.	T	S	I	E	Q	I	C	L	I	A	E	E
Query Conservation																.						.																.																												.	.	.	.
Alig confidence																.						.																.																												.	.	.	.
Template Conservation
Template Sequence		Q	I	T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	E	A	I	N	R	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	I	R	Y	Q	T	S	A	N	G	N	E	I	V	D	V	M	C	H	A	T	L	T	H	R	L	M	S
Template Known Secondary structure										S	S	T	T	T	T	T	T												T	T								S	S												T	T	S											S																	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		169					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		E	.	.	.	.	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	H	R	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	.	.	.	.	.	.	.	.	.	.	.	P	A	S	I	A	A	R	G	Y	I	S	T	R	V	E	L	G	E	A	A	A	I	F	M
Template Known Secondary structure		S	S						S					S	S	T	T				.	.	.	.	.	.	.	.	.	.	.																T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.												.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions