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Job DescriptionP24554
Confidence97.56%DateThu Jan 5 11:41:40 GMT 2012
Rank149Aligned Residues110
% Identity15%Templatec2ja1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from b. cereus with ttp bound as phosphate2 donor.
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120 ........ .130.........140.........150.........160.........170.
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Query Sequence  PGSAILIGGNPGAGKSTLLLQTLCKLA. QQMKTLYV. TGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQP
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Template Sequence  NGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEHIT. . . . EEL
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STTSSTT

TT

SS
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TTS

SSGGGGGGG

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   7..10.........20.........30.........40.........50.........60.........70......... 80..
 
   172.......180.........190.........200.........210.........220..
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Query Sequence  KLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVT
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Template Sequence  DVIAIDEVQFF. . . . . . . . . . . . . . . DGDIVEVVQVLANRGYRVIVAGLDQ
Template Known Secondary structure 
SSGGGS...............
TTTT
SB
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   83......90... ......100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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