Job Description P24554 Confidence 96.06% Date Thu Jan 5 11:41:40 GMT 2012 Rank 348 Aligned Residues 109 % Identity 24% Template c2iutA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:dna translocase ftsk; PDBTitle: p. aeruginosa ftsk motor domain, dimeric Resolution 2.25 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																																													.	.	.	.
Query SS confidence																													.	.	.	.	.																																													.	.	.	.
Query Sequence		I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	.	.	.	.	.	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	.	.	.	.
Query Conservation																													.	.	.	.	.																																													.	.	.	.
Alig confidence																													.	.	.	.	.							.	.	.	.	.	.	.																																.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		L	L	V	A	G	T	T	G	S	G	K	S	V	G	V	N	A	M	L	L	S	I	L	F	K	S	T	P	S	E	A	R	L	I	M	I	D	P	.	.	.	.	.	.	.	K	M	L	E	L	S	I	Y	E	G	I	P	H	L	L	C	P	V	V	T	D	M	K	E	A	A	N	A	L	R	W	S	V	A	E
Template Known Secondary structure								T	T	S	S														T	T			T	T	T								S	.	.	.	.	.	.	.	S	S					T	T	T	T		T	T	B	S	S	S		B
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.								500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
																																																						169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.
Template Sequence		M	E	R	R	Y	R	L	M	A	A	M	G	V	R	N	L	A	G	F	N	R	K	V	K	D	A	E	E	A	G	T	P	L	T	D	P	L	F	R	R	E	S	P	D	D	E	P	P	Q	L	S	T	L	P	T	I	V	V	V	V	D	E	F	A	D	M	M	M	I	V	G	.	.	.	.	.	.	.	K	K
Template Known Secondary structure													T		S	S														T	T				B		T	T					S	T	T					B												S			T	T					T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.								.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	E	L	I	A	R	I	A	Q	K	A	R	A	A	G	I	H	L	I	L	A	T	Q
Template Known Secondary structure														T	T	T	T								S
Template Predicted Secondary structure
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions