Job Description P24554 Confidence 95.05% Date Thu Jan 5 11:41:40 GMT 2012 Rank 443 Aligned Residues 113 % Identity 16% Template c2gedB_ PDB info PDB header:protein transport, signaling protein Chain: B: PDB Molecule:signal recognition particle receptor beta PDBTitle: signal recognition particle receptor beta-subunit in2 nucleotide-free dimerized form Resolution 2.20 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	.	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V
Query Conservation																									.
Alig confidence																									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	I	I	A	G	P	Q	N	S	G	K	T	S	L	L	T	L	L	T	A	D	Y	D	G	S	G	V	T	L	V	D	F	P	G	H	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	Y	K	L	S	D	Y	L	K	T	R	A	K	F	V	K	G	L	I	F	M
Template Known Secondary structure									T	T	S	S															T	T		S				T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											G	G	G
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	.	.	.	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D
Query Conservation																																.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.
Template Sequence		V	D	S	T	.	.	.	.	.	.	.	.	.	V	D	P	K	K	L	T	T	T	A	E	F	L	V	D	I	L	S	I	T	E	S	S	C	E	N	G	I	D	I	L	I	A	C	N	K	S	E	L	F	T	A	R	P	P	S	K	I	K	D	A	L	E
Template Known Secondary structure				S	S	.	.	.	.	.	.	.	.	.																								S	T	T											T	T	S	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions