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Job DescriptionP24554
Confidence93.73%DateThu Jan 5 11:41:40 GMT 2012
Rank489Aligned Residues94
% Identity17%Templatec2fwrA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:dna repair protein rad25; PDBTitle: structure of archaeoglobus fulgidis xpb
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  VVPGSAILIGGNPGAGKSTLLLQTLCKLAQQMKTLYVTGEES. LQQVAMRAHRLG. . . . . . . . . . LPTDNLNMLSETSIE
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Template Sequence  WLVDKRGCIVLPTGSGKTHVAMAAINELST. . PTLIVVPTLALAEQWKERLGIFGEEYVGEFSGRIKELKPLTVSTYDSA
Template Known Secondary structure  TTTT

TTS

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SSGGGG
GGGBSSS
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   105....110.........120.........130.... .....140.........150.........160.........170.........180..
 
   161........170.........180.......
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Query Sequence  QICLIAEEEQPKLMVIDSIQVMHMADV
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Template Sequence  YVNAEKLGNRFMLLIFDEVHHLPAESY
Template Known Secondary structure  TTTT
STGGGTTSTTT
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   183......190.........200.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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