Job Description P24554 Confidence 99.91% Date Thu Jan 5 11:41:40 GMT 2012 Rank 27 Aligned Residues 198 % Identity 26% Template c2dflA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament Resolution 2.90 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.									.	.
Query SS confidence																																																							.	.	.	.	.	.	.									.	.
Query Sequence		E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	.	.	.	.	.	.	.	T	L	Y	V	T	G	E	E	.	.	S	L	Q	Q	V	A	M	R	A	H
Query Conservation																																																							.	.	.	.	.	.	.									.	.
Alig confidence																																																							.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		M	N	V	K	K	I	S	T	G	S	Q	A	L	D	G	L	L	A	G	G	I	E	T	R	T	M	T	E	F	F	G	E	F	G	S	G	K	T	Q	L	C	H	Q	L	S	V	N	V	Q	L	P	P	E	K	G	G	L	S	G	K	A	V	Y	I	D	T	E	G	T	F	R	W	E	R	I	E	N	M	A	K
Template Known Secondary structure							B			S									T	S	S	B		T	T	S							S	T	T	S	S	T	T										S	S	S		G	G	G	T	S		S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		143	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																				.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence										.	.	.	.																				.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		R	L	G	L	P	T	D	N	.	.	.	.	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	E	.	.	.	.	.	.	.	.	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	.	.	.	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F
Query Conservation										.	.	.	.																				.	.	.	.	.	.	.	.																			.	.	.
Alig confidence										.	.	.	.																				.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		A	L	G	L	D	I	D	N	V	M	N	N	I	Y	Y	I	R	A	I	N	T	D	H	Q	I	A	I	V	D	D	L	Q	E	L	V	S	K	D	P	S	I	K	L	I	V	V	D	S	V	T	S	H	F	R	A	E	Y	P	G	R	E	N	L	A	V	R	Q	Q	K	L	N	K	H	L	H	Q	L	T	R	L
Template Known Secondary structure				T									T								S										T									T	T									T	T							S		T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M	T	E	Q	G	L	R	E
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.																	.																		.
Template Conservation																			.	.	.	.	.	.	.	.																	.																		.
Template Sequence		A	E	V	Y	D	I	A	V	I	I	T	N	Q	V	M	H	T	.	.	.	.	.	.	.	.	L	Y	H	V	P	G	I	R	I	Q	L	K	K	S	R	G	.	N	R	R	I	A	R	V	V	D	A	P	H	L	P	E	G	E	.	V	V	F	A	L	T	E	E	G	I	R	D
Template Known Secondary structure				T	T	T													.	.	.	.	.	.	.	.			S	S		S										T	.	T										S	S	S					.							T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.																	.																		.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions