Job Description P24554 Confidence 99.94% Date Thu Jan 5 11:41:40 GMT 2012 Rank 11 Aligned Residues 204 % Identity 23% Template c2cvhB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase Resolution 2.20 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	.	.	.	.	D	N	L	N
Query Conservation																																																																										.	.	.	.
Alig confidence																																																																										.	.	.	.
Template Conservation
Template Sequence		L	S	T	G	T	K	S	L	D	S	L	L	G	G	G	F	A	P	G	V	L	T	Q	V	Y	G	P	Y	A	S	G	K	T	T	L	A	L	Q	T	G	L	L	S	G	K	K	V	A	Y	V	D	T	E	G	G	F	S	P	E	R	L	V	Q	M	A	E	T	R	G	L	N	P	E	E	A	L	S	R	F	I
Template Known Secondary structure		B			S								T	T	S	S	B		T	T	S							S	T	T	S	S														S							S	S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		153	.	.	.	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																																																																				.
Query SS confidence								.	.	.	.	.	.																																																																				.
Query Sequence		M	L	S	E	T	S	.	.	.	.	.	.	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	.
Query Conservation								.	.	.	.	.	.																																																																				.
Alig confidence								.	.	.	.	.	.																									.																																											.
Template Conservation																																						.
Template Sequence		L	F	T	P	S	D	F	K	E	Q	R	R	V	I	G	S	L	K	K	T	V	D	S	N	F	A	L	V	V	V	D	S	I	T	A	H	.	Y	R	A	E	E	N	R	S	G	L	I	A	E	L	S	R	Q	L	Q	V	L	L	W	I	A	R	K	H	N	I	P	V	I	V	I	N	Q	V	H	F	D	S	R
Template Known Secondary structure							S	S																T	T										S		S	.	B	T	T	B																									T									S	S	S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
						226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M	T	E	Q	G	L	R	E	V	S
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		T	E	M	T	K	P	V	A	E	Q	T	L	G	Y	R	C	K	D	I	L	R	L	D	K	L	P	K	P	G	L	R	V	A	V	L	E	R	H	R	F	R	P	E	G	L	M	A	Y	F	R	I	T	E	R	G	I	E	D	V	E
Template Known Secondary structure		S	S				S	S		S	T	T						S									S	S	T	T										S	S	S		T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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