Job Description P24554 Confidence 95.89% Date Thu Jan 5 11:41:40 GMT 2012 Rank 371 Aligned Residues 91 % Identity 21% Template c1w4rC_ PDB info PDB header:transferase Chain: C: PDB Molecule:thymidine kinase; PDBTitle: structure of a type ii thymidine kinase with bound dttp Resolution 1.83 Å

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		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	.	Q	Q	M	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H	R	L	G	L	P	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K
Query Conservation																													.
Alig confidence																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		R	G	Q	I	Q	V	I	L	G	P	M	F	S	G	K	S	T	E	L	M	R	R	V	R	R	F	Q	I	A	Q	Y	K	C	L	V	I	K	Y	A	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	L	P	A	C	L	L	R	D	V	A	Q	E	A	L	.	.	G	V	A
Template Known Secondary structure												T	T	S															T	T	T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	G	G	G	G						.	.	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		V	I	G	I	D	E	G	Q	F	F	.	.	.	.	.	.	.	.	.	.	.	.	P	D	I	V	E	F	C	E	A	M	.	.	.	.	A	N	A	G	K	T	V	I	V	A	A
Template Known Secondary structure							S	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	T	T									.	.	.	.			T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.													.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions