Job Description P24554 Confidence 99.91% Date Thu Jan 5 11:41:40 GMT 2012 Rank 24 Aligned Residues 186 % Identity 26% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.								.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.												.	.
Query SS confidence																																																				.	.	.	.	.	.	.												.	.
Query Sequence		E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	.	.	.	.	.	.	.	Q	M	K	T	L	Y	V	T	G	E	E	.	.	S	L	Q	Q	V	A	M	R	A	H
Query Conservation																																																				.	.	.	.	.	.	.												.	.
Alig confidence																																																				.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		S	E	L	I	C	L	T	T	G	S	K	N	L	D	T	L	L	G	G	G	V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q
Template Known Secondary structure				S						S									T	S	S			S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		143	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure								.	.	.	.											.	.	.	.	.	.	.
Query SS confidence								.	.	.	.											.	.	.	.	.	.	.
Query Sequence		R	L	G	L	P	T	.	.	.	.	D	N	L	N	M	L	S	E	T	S	.	.	.	.	.	.	.	I	E	Q	I	C	L	I	A	E	E	E	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	V	A	Q	V	R	E	T	A	A	Y	L	T	R	F	A	K	T	R
Query Conservation								.	.	.	.											.	.	.	.	.	.	.
Alig confidence								.	.	.	.											.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	.	.	.	.	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F
Template Known Secondary structure			T								G	G	G								S	T	T									T							S										T	T	G	G	G		.	.	.	.		T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M	T	E	Q	G	L	R
Query Conservation
Alig confidence												.	.	.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Template Sequence		G	V	A	V	V	V	T	N	Q	V	.	.	.	.	.	.	.	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K	.	G	C	Q	R	L	C	K	V	V	E	C	V	.	.	.	.	.	.	.	.	.	F	A	I	Y	E	D	G	V	G
Template Known Secondary structure												.	.	.	.	.	.	.										S									S	.	T	T											.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.								.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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