Job Description P24554 Confidence 99.87% Date Thu Jan 5 11:41:40 GMT 2012 Rank 36 Aligned Residues 200 % Identity 21% Template c1pznG_ PDB info PDB header:recombination Chain: G: PDB Molecule:dna repair and recombination protein rad51; PDBTitle: rad51 (rada) Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.								.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		S	L	E	E	L	P	R	F	S	T	G	F	K	E	F	D	R	V	L	G	G	G	V	V	P	G	S	A	I	L	I	G	G	N	P	G	A	G	K	S	T	L	L	L	Q	T	L	C	K	L	A	Q	Q	M	.	.	.	.	.	.	.	K	T	L	Y	V	T	G	E	E	S	L	Q	Q	V	A	M	R	A	H
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	A	T	I	G	R	I	S	T	G	S	K	S	L	D	K	L	L	G	G	G	I	E	T	Q	A	I	T	E	V	F	G	E	F	G	S	G	K	T	Q	L	A	H	T	L	A	V	X	V	Q	L	P	P	E	E	G	G	L	N	G	S	V	I	W	I	D	T	E	N	T	F	R	P	E	R	I	R	E	I
Template Known Secondary structure			T	T	S							S								T	T	T	S			S	S								S	T	T	S	S												T	T	S		G	G	G	T			S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		143	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.													170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.
Predicted Secondary structure				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		R	L	.	.	.	.	.	.	G	L	P	T	D	N	L	N	M	L	S	E	T	S	I	E	Q	I	C	L	I	A	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	K	L	M	V	I	D	S	I	Q	V	M	H	M	A	D	V	Q	S	S	P	G	S	.	.	.	V	A	Q	V	R	E	T	A
Query Conservation				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		A	Q	N	R	G	L	D	P	D	E	V	L	K	H	I	Y	V	A	R	A	F	N	S	N	H	Q	X	L	L	V	Q	Q	A	E	D	K	I	K	E	L	L	N	T	D	R	P	V	K	L	L	I	V	D	S	L	T	S	H	F	R	S	E	Y	I	G	R	G	A	L	A	E	R	Q	Q	K	L	A	K	H	L
Template Known Secondary structure			T	T	S	S	S		T	T	T	G	G	G	S								S																	T	T	T	S	S	S	S									S	S	S	T	T					S		S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	T	R	F	A	K	T	R	G	V	A	I	V	M	V	G	H	V	T	K	D	G	S	L	A	G	P	K	V	L	E	H	C	I	D	C	S	V	L	L	D	G	D	A	D	S	R	F	R	T	L	R	S	H	K	N	R	F	G	A	V	N	E	L	G	V	F	A	M	T	E	Q	G	L	R	E
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.																.																		.
Template Conservation																									.	.	.	.	.	.	.	.																.																		.
Template Sequence		A	D	L	H	R	L	A	N	L	Y	D	I	A	V	F	V	T	N	Q	V	Q	H	I	.	.	.	.	.	.	.	.	L	A	H	S	A	T	L	R	V	Y	L	R	K	G	K	.	G	G	K	R	I	A	R	L	I	D	A	P	H	L	P	E	G	.	E	A	V	F	S	I	T	E	K	G	I	E	D
Template Known Secondary structure											T	T													.	.	.	.	.	.	.	.			T	T		S									T	.	T	T							S		S	S	S	S			S	.								T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.																.																		.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.	.	.	300	.	.	.		.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions